PYTHON

Python - Computer Science
PLACE ORDER
Please read the FE.dox to see the 5 questions that need to be done.  Price can negotiate. Rules: The only modules allowed for this exam are the os and re modules. Q1) Write a program that asks the user for a file containing a FASTA nucleotide sequence (included is a file called sequence.fasta you can use). Then prompt the user to select from the following menu: A. Calculate DNA composition: This will print to the screen the numbers of A, G, C and T n_u_c_l_e_o_t_i_d_e_s_,_ _a_n_d_ _a_n_y_ _u_n_k_n_o_w_n_s_ _(_N_’s_)_._ _ B. Calculate AT content: Prints to the screen the percentage of AT in the sequence. C. Calculate GC content: Prints to the screen the percentage of GC in the sequence. D. Compliment: Prints to the screen the compliment of the DNA sequence. E. Reverse compliment: Prints to the screen the reverse compliment. Each menu item above should be implemented in its own function. The function should be called when the user selects the respective menu item. The functions should accept as argument the DNA sequence and then perform the appropriate calculations\algorithm. Input validation: Check to see that the file name entered by the user exists AND that the sequence is in FASTA format. You can assume that there is only one sequence in the file. Q2) Write a program that asks the user for a file containing a FASTA nucleotide sequence (you can use the same sequence.fasta file as above). Then prompt the user to select a frame (number 1 through 6). Your program should then find the translation (protein sequence) of the nucleotide sequence in that frame. Print the translation to the screen. Input validation: Check to see that the file name entered by the user exists AND that the sequence is in FASTA format. You can assume that there is only one sequence in the file. Q3) Write a program that asks the user for a sequence in GenBank format (included is a file called sequence.gb that you can use). Your program should convert the GenBank formatted sequence into FASTA format. Write the FASTA formatted sequence to a file, name of which should include the accession number (i.e. NM_001250672.txt, where NM_001250672 is the accession number). Q4) Write a program that asks the user for a file containing a nucleotide sequence AND the name of a restriction enzyme. Your program should return the positions in the sequence where the enzyme cuts. Parse out the enzymes and their cut sites from the attached RestrictionEnzymes.txt file. Q5) Read in a whole genome (in FASTA format – _file called genome.txt, see attached) and compute the background codon frequencies. The background frequency of a codon is computed by the formula: background_frq(codon) = 100 * N(codon)/ Total_codons where N(codon) is the number of occurrence of the codon across the entire genome, and Total_codons is the total number of all codons in the whole genome. Print out the background frequency of each codon, from AAA to TTT. Use a dictionary in your solution. Your program should count codons that appear in all reading frames and then calculate and display the average. >NM_001250672.2 Glycine max cationic peroxidase 2 (PRX2), mRNA GAGCAAGAGTGAAGAGCGAAGAGAATGGCTCCCAAGGGTTTAATCTTTTTGGCTGTGTTATGCTTCTCAG CACTGTCACTGAGTCGTTGTCTTGCGGAGGATAATGGACTTGTTATGAACTTCTACAAGGAATCATGCCC TCAGGCTGAAGACATCATCAAAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCC TGGCTCAGAAACATCTTCCATGACTGTGCTGTTCAGAGTTGTGATGCTTCACTGTTGCTGGACTCCACAA GAAGGAGCTTGTCTGAGAAGGAAACAGATAGAAGCTTTGGGTTGAGAAATTTCAGGTACATTGAGACCAT CAAAGAAGCTTTGGAAAGGGAATGCCCAGGAGTTGTTTCCTGTGCTGATATCCTCGTTCTCTCTGCCAGA GATGGCATTGTTTCGCTAGGAGGTCCCCATATCCCTCTTAAAACAGGAAGAAGGGATGGTAGAAGGAGCA GAGCCGATGTGGTAGAGCAGTTCCTCCCAGACCACAATGAATCCATTTCTGCAGTTCTTGACAAGTTTGG TGCCATGGGAATTGACACCCCCGGCGTAGTTGCATTGCTTGGAGCACACAGTGTTGGTCGAACCCATTGT GTGAAGTTGGTGCACCGTTTGTACCCAGAGATTGATCCAGCTCTGAACCCTGACCACGTCCCTCACATTC TGAAGAAGTGCCCTGATGCCATTCCAGACCCTAAGGCCGTGCAGTACGTGAGAAACGACCGTGGCACCCC CATGATTCTAGACAACAATTACTACAGAAATATATTGGACAACAAGGGCTTGTTGATAGTGGATCACCAA CTAGCCAATGACAAGAGGACCAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAGGACTATTTCTTCAAGG AGTTTTCTAGAGCCATTACTTTGCTCTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGAAA GCAGTGCAATGCTGCCAACAAGCACCATGAGGAGCCTTAATTGCTTCCCGCTTAATTTGGGCCTTGAATT TTCTTCCCCTTCTCTATGTGGAAGAAATCTGTAAGATATTATGCAAAAAATAATTAAGGTGTTTTTCTTT AAATGGGTTGGTTGATTGGTTCAATGAACCGATCAAGACCACAGCAGGTTCATGGGGATGCGAGGATTAA GACGCTTTGTTTTTTAATCTTCCGATGTCACTCTTGTTTGTTAGTTTGTTTTTTTATTTTTTATTTCAAT AAGTACTGTGCAAGTAGGTTAGAGTTGGGTAGAAGGGCATGTTCATGGTGTTAATTACTATGTTATGTAT GCATGTGAGTGCTGCTATCGATGGCAAGATGTCAATGTATGCGTGTAGTGCTGTTATCGATGAGAGTGAA AATGTTTATGATATCCACACTAATAAAGCTAGCTTGCTCTTGCTACATAATAAATAAATCATGGCCCACG GTCATTATACAAAAAAAAAAAAAAAAAA AanI TTATAA AarI CACCTGCNNNNNNNN AasI GACNNNNNNGTC AatI AGGCCT AatII GACGTC AbsI CCTCGAGG AccI GTMKAC AccII CGCG AccIII TCCGGA Acc16I TGCGCA Acc36I ACCTGCNNNNNNNN Acc65I GGTACC AccB1I GGYRCC AccB7I CCANNNNNTGG AccBSI CCGCTC AceIII CAGCTCNNNNNNNNNNN AciI CCGC AclI AACGTT AclWI GGATCNNNNN AcoI YGGCCR AcsI RAATTY AcuI CTGAAGNNNNNNNNNNNNNNNN AcvI CACGTG AcyI GRCGYC AdeI CACNNNGTG AfaI GTAC AfeI AGCGCT AfiI CCNNNNNNNGG AflII CTTAAG AflIII ACRYGT AgeI ACCGGT AgsI TTSAA AhdI GACNNNNNGTC AhlI ACTAGT AjiI CACGTC AjnI CCWGG AjuI GAANNNNNNNTTGGNNNNNNNNNNN AleI CCAANNNNNNNTTCNNNNNNNNNNNN AlfI CACNNNNGTG AloI GCANNNNNNTGCNNNNNNNNNNNN AluI GAACNNNNNNTCCNNNNNNNNNNNN AluBI GGANNNNNNGTTCNNNNNNNNNNNN AlwI AGCT Alw21I AGCT Alw26I GGATCNNNNN Alw44I GWGCWC AlwFI GTCTCNNNNN AlwNI GTGCAC Ama87I GAAAYNNNNNRTG Aor13HI CAGNNNCTG Aor51HI CYCGRG AoxI TCCGGA ApaI AGCGCT ApaBI GGCC ApaLI GGGCCC ApeKI GCANNNNNTGC ApoI GTGCAC ApyPI GCWGC AquII RAATTY AquIII ATCGACNNNNNNNNNNNNNNNNNNNN AquIV GCCGNACNNNNNNNNNNNNNNNNNNNN ArsI GAGGAGNNNNNNNNNNNNNNNNNNNN AscI GRGGAAGNNNNNNNNNNNNNNNNNNN AseI GACNNNNNNTTYGNNNNNNNNNNN Asi256I CRAANNNNNNGTCNNNNNNNNNNNNN AsiGI GGCGCGCC AsiSI ATTAAT AspI GATC Asp700I ACCGGT Asp718I GCGATCGC AspA2I GACNNNGTC AspCNI GAANNNNTTC AspEI GGTACC AspLEI CCTAGG AspS9I GCCGC AssI GACNNNNNGTC AsuII GCGC AsuC2I GGNCC AsuHPI AGTACT AsuNHI TTCGAA AvaI CCSGG AvaII GGTGANNNNNNNN AvaIII GCTAGC AviII CYCGRG AvrII GGWCC AxyI ATGCAT BaeI TGCGCA BaeGI CCTAGG BalI CCTNAGG BamHI ACNNNNGTAYCNNNNNNNNNNNN BanI GRTACNNNNGTNNNNNNNNNNNNNNN BanII GKGCMC BanIII TGGCCA BarI GGATCC BasI GGYRCC BauI GRGCYC BbeI ATCGAT Bbr7I GAAGNNNNNNTACNNNNNNNNNNNN BbrPI GTANNNNNNCTTCNNNNNNNNNNNN BbsI CCANNNNNTGG BbuI CACGAG BbvI GGCGCC Bbv12I GAAGACNNNNNNNNNNN BbvCI CACGTG BccI GAAGACNNNNNN BceAI GCATGC BcefI GCAGCNNNNNNNNNNNN BcgI GWGCWC BciVI CCTCAGC BclI CCATCNNNNN BcnI ACGGCNNNNNNNNNNNNNN BcuI ACGGCNNNNNNNNNNNNN BdaI CGANNNNNNTGCNNNNNNNNNNNN BfaI GCANNNNNNTCGNNNNNNNNNNNN BfiI GTATCCNNNNNN BfmI TGATCA BfoI CCSGG BfrI ACTAGT BfuI TGANNNNNNTCANNNNNNNNNNNN BfuAI CTAG BfuCI ACTGGGNNNNN BglI CTRYAG BglII RGCGCY BisI CTTAAG BlnI GTATCCNNNNNN BlpI ACCTGCNNNNNNNN BlsI GATC BmcAI GCCNNNNNGGC Bme18I AGATCT Bme1390I GCNGC BmeRI CCTAGG BmeT110I GCTNAGC BmgI GCNGC BmgBI AGTACT BmgT120I GGWCC BmiI CCNGG BmrI GACNNNNNGTC BmrFI CYCGRG BmsI GKGCCC BmtI CACGTC BmuI GGNCC BoxI GGNNCC BpiI ACTGGGNNNNN BplI CCNGG BpmI GCATCNNNNNNNNN Bpu10I GCTAGC Bpu14I ACTGGGNNNNN Bpu1102I GACNNNNGTC BpuAI GAAGACNNNNNN BpuEI GAGNNNNNCTCNNNNNNNNNNNNN BpuMI CTGGAGNNNNNNNNNNNNNNNN BpvUI CCTNAGC BsaI TTCGAA Bsa29I GCTNAGC BsaAI GAAGACNNNNNN BsaBI CTTGAGNNNNNNNNNNNNNNNN BsaHI CCSGG BsaJI CGATCG BsaMI GGTCTCNNNNN BsaWI ATCGAT BsaXI YACGTR BsbI GATNNNNATC Bsc4I GRCGYC BscAI CCNNGG BscGI GAATGCN Bse1I WCCGGW Bse8I ACNNNNNCTCCNNNNNNNNNN Bse21I GGAGNNNNNGTNNNNNNNNNNNN Bse118I CAACACNNNNNNNNNNNNNNNNNNNNN BseAI CCNNNNNNNGG BseBI GCATCNNNNNN BseCI CCCGT BseDI ACTGGN Bse3DI GATNNNNATC BseGI CCTNAGG BseJI RCCGGY BseLI TCCGGA BseMI CCWGG BseMII ATCGAT BseNI CCNNGG BsePI GCAATGNN BseRI GGATGNN BseSI GATNNNNATC BseXI CCNNNNNNNGG BseX3I GCAATGNN BseYI CTCAGNNNNNNNNNN BsgI ACTGGN Bsh1236I GCGCGC Bsh1285I GAGGAGNNNNNNNNNN BshFI GKGCMC BshNI GCAGCNNNNNNNNNNNN BshTI CGGCCG BshVI CCCAGC BsiEI GTGCAGNNNNNNNNNNNNNNNN BsiHKAI CGCG BsiHKCI CGRYCG BsiSI GGCC BsiWI GGYRCC BslI ACCGGT BslFI ATCGAT BsmI CGRYCG BsmAI GWGCWC BsmBI CYCGRG BsmFI CCGG BsnI CGTACG Bso31I CCNNNNNNNGG BsoBI GGGACNNNNNNNNNNNNNN Bsp13I GAATGCN Bsp19I GTCTCNNNNN Bsp24I CGTCTCNNNNN Bsp68I GGGACNNNNNNNNNNNNNN Bsp119I GGCC Bsp120I GGTCTCNNNNN Bsp143I CYCGRG Bsp1286I TCCGGA Bsp1407I CCATGG Bsp1720I GACNNNNNNTGGNNNNNNNNNNNN BspACI CCANNNNNNGTCNNNNNNNNNNNNN BspCNI TCGCGA BspDI TTCGAA BspD6I GGGCCC BspEI GATC BspFNI GDGCHC BspGI TGTACA BspHI GCTNAGC BspLI CCGC BspMI CTCAGNNNNNNNNN BspNCI ATCGAT BspOI GACTCNNNNNN BspPI TCCGGA BspQI CGCG BspTI CTGGAC BspT104I TCATGA BspT107I GGNNCC BspTNI ACCTGCNNNNNNNN BsrI CCAGA BsrBI GCTAGC BsrDI GGATCNNNNN BsrFI GCTCTTCNNNN BsrGI CTTAAG BsrSI TTCGAA BssAI GGYRCC BssECI GGTCTCNNNNN BssHII ACTGGN BssKI CCGCTC BssMI GCAATGNN BssNI RCCGGY BssNAI TGTACA BssSI ACTGGN BssT1I RCCGGY Bst6I CCNNGG Bst98I GCGCGC Bst1107I CCNGG BstACI GATC BstAFI GRCGYC BstAPI GTATAC BstAUI CACGAG BstBI CCWWGG Bst2BI CTCTTCNNNN BstBAI CTTAAG Bst4CI GTATAC BstC8I GRCGYC BstDEI CTTAAG BstDSI GCANNNNNTGC BstEII TGTACA BstENI TTCGAA BstF5I CACGAG BstFNI YACGTR BstH2I ACNGT BstHHI GCNNGC BstKTI CTNAG BstMAI CCRYGG BstMBI GGTNACC BstMCI CCTNNNNNAGG BstMWI GGATGNN BstNI CGCG BstNSI RGCGCY BstOI GCGC BstPI GATC BstPAI GTCTCNNNNN BstSCI GATC BstSFI CGRYCG BstSLI GCNNNNNNNGC BstSNI CCWGG BstUI RCATGY Bst2UI CCWGG BstV1I GGTNACC BstV2I GACNNNNGTC BstXI CCNGG BstX2I CTRYAG BstYI GKGCMC BstZI TACGTA BstZ17I CGCG BsuI CCWGG Bsu15I GCAGCNNNNNNNNNNNN Bsu36I GAAGACNNNNNN BsuRI CCANNNNNNTGG BsuTUI RGATCY BtgI RGATCY BtgZI CGGCCG BthCI GTATAC BtrI GTATCCNNNNNN BtsI ATCGAT BtsCI CCTNAGG BtuMI GGCC BveI ATCGAT Cac8I CCRYGG CaiI GCGATGNNNNNNNNNNNNNN CciI GCNGC CciNI CACGTC CdiI GCAGTGNN CdpI GGATGNN CelII TCGCGA CfoI ACCTGCNNNNNNNN CfrI GCNNGC Cfr9I CAGNNNCTG Cfr10I TCATGA Cfr13I GCGGCCGC Cfr42I CATCG ChaI GCGGAGNNNNNNNNNNNNNNNNNNNN CjeI GCTNAGC CjeNII GCGC CjePI YGGCCR CjeP659IV CCCGGG CjuI RCCGGY CjuII GGNCC ClaI CCGCGG CpoI GATC CseI CCANNNNNNGTNNNNNNNNNNNNNNN CsiI ACNNNNNNTGGNNNNNNNNNNNNNN CspI GAGNNNNNGT Csp6I CCANNNNNNNTCNNNNNNNNNNNNNN Csp45I GANNNNNNNTGGNNNNNNNNNNNNN CspAI CACNNNNNNNGAA CspCI CAYNNNNNRTG CstMI CAYNNNNNCTC CviAII ATCGAT CviJI CGGWCCG CviKI-1 GACGCNNNNNNNNNN CviQI ACCWGGT DdeI CGGWCCG DinI GTAC DpnI TTCGAA DpnII ACCGGT DraI CAANNNNNGTGGNNNNNNNNNNNN DraII CCACNNNNNTTGNNNNNNNNNNNNN DraIII AAGGAGNNNNNNNNNNNNNNNNNNNN DraRI CATG DrdI RGCY DrdII RGCY DrdIV GTAC DriI CTNAG DseDI GGCGCC EaeI GATC EagI GATC Eam1104I TTTAAA Eam1105I RGGNCCY EarI CACNNNGTG EciI CAAGNACNNNNNNNNNNNNNNNNNNNN Ecl136II GACNNNNNNGTC EclXI GAACCA Eco24I TACGACNNNNNNNNNNNNNNNNNNNN Eco31I GACNNNNNGTC Eco32I GACNNNNNNGTC Eco47I YGGCCR Eco47III CGGCCG Eco52I CTCTTCNNNN Eco57I GACNNNNNGTC Eco72I CTCTTCNNNN Eco81I GGCGGANNNNNNNNNNN Eco88I GAGCTC Eco91I CGGCCG Eco105I GRGCYC Eco130I GGTCTCNNNNN Eco147I GATATC EcoHI GGWCC EcoICRI AGCGCT Eco57MI CGGCCG EcoNI CTGAAGNNNNNNNNNNNNNNNN EcoO65I CACGTG EcoO109I CCTNAGG EcoRI CYCGRG EcoRII GGTNACC EcoRV TACGTA EcoT14I CCWWGG EcoT22I AGGCCT EcoT38I CCSGG Eco53kI GAGCTC EgeI CTGRAGNNNNNNNNNNNNNNNN EheI CCTNNNNNAGG ErhI GGTNACC EsaBC3I RGGNCCY EsaSSI GAATTC Esp3I CCWGG FaeI GATATC FaiI CCWWGG FalI ATGCAT FaqI GRGCYC FatI GAGCTC FauI GGCGCC FauNDI GGCGCC FbaI CCWWGG FblI TCGA FinI GACCAC FmuI CGTCTCNNNNN Fnu4HI CATG FokI YATR FriOI AAGNNNNNCTTNNNNNNNNNNNNN FseI GGGACNNNNNNNNNNNNNN FspI CATG FspAI CCCGCNNNNNN FspBI CATATG FspEI TGATCA Fsp4HI GTMKAC GdiII GGGAC GlaI GGNCC GluI GCNGC GsaI GGATGNNNNNNNNNNNNN GsuI GRGCYC HaeI GGCCGGCC HaeII TGCGCA HaeIII RTGCGCAY HaeIV CTAG HapII CCNNNNNNNNNNNNNNNN HgaI GCNGC HgiEII CGGCCR HhaI GCGC Hin1I GCNGC Hin1II CCCAGC Hin4I CTGGAGNNNNNNNNNNNNNNNN Hin6I WGGCCW HinP1I RGCGCY HincII GGCC HindII GAYNNNNNRTCNNNNNNNNNNNNNN HindIII GAYNNNNNRTCNNNNNNNNNNNNN HinfI CCGG HpaI GACGCNNNNNNNNNN HpaII ACCNNNNNNGGT HphI GCGC Hpy8I GRCGYC Hpy99I CATG Hpy166II GAYNNNNNVTCNNNNNNNNNNNNN Hpy188I GABNNNNNRTCNNNNNNNNNNNNN Hpy188III GCGC HpyAV GCGC HpyCH4III GTYRAC HpyCH4IV GTYRAC HpyCH4V AAGCTT HpyF3I GANTC HpyF10VI GTTAAC Hsp92I CCGG Hsp92II GGTGANNNNNNNN HspAI GTNNAC KasI CGWCG KflI GTNNAC KpnI TCNGA Kpn2I TCNNGA KspI CCTTCNNNNNN Ksp22I ACNGT KspAI ACGT Kzo9I TGCA LguI CTNAG LlaGI GCNNNNNNNGC LpnI GRCGYC LpnPI CATG Lsp1109I GCGC LweI GGCGCC MabI GGGWCCC MaeI GGTACC MaeII TCCGGA MaeIII CCGCGG MalI TGATCA MaqI GTTAAC MauBI GATC MbiI GCTCTTCNNNN MboI CTNGAYG MboII RGCGCY McaTI CCDGNNNNNNNNNNNNNN MfeI GCAGCNNNNNNNNNNNN MflI GCATCNNNNNNNNN MhlI ACCWGGT MjaIV CTAG MlsI ACGT MluI GTNAC MluNI GATC MlyI CRTTGACNNNNNNNNNNNNNNNNNNNNN Mly113I CGCGCGCG MmeI CCGCTC MnlI GATC Mph1103I GAAGANNNNNNNN MreI GCGCGC MroI CAATTG MroNI RGATCY MroXI GDGCHC MscI GTNNAC MseI TGGCCA MslI ACGCGT MspI TGGCCA Msp20I GAGTCNNNNN MspA1I GGCGCC MspCI TCCRACNNNNNNNNNNNNNNNNNNNN MspJI CCTCNNNNNNN MspR9I ATGCAT MssI CGCCGGCG MunI TCCGGA MvaI GCCGGC Mva1269I GAANNNNTTC MvnI TGGCCA MvrI TTAA MwoI CAYNNNNRTG NaeI CCGG NarI TGGCCA NciI CMGCKG NcoI CTTAAG NdeI CNNRNNNNNNNNNNNNN NdeII CCNGG NgoAVIII GTTTAAAC NgoMIV CAATTG NhaXI CCWGG NheI GAATGCN NlaIII CGCG NlaIV CGATCG NlaCI GCNNNNNNNGC Nli3877I GCCGGC NmeAIII GGCGCC NmeDI CCSGG NmuCI CCATGG NotI CATATG NruI GATC NsbI GACNNNNNTGANNNNNNNNNNNNN NsiI TCANNNNNGTCNNNNNNNNNNNNNN NspI GCCGGC NspV CAAGRAG OliI GCTAGC PabI CATG PacI GGNNCC PaeI CATCACNNNNNNNNNNNNNNNNNNN PaeR7I CYCGRG PagI GCCGAGNNNNNNNNNNNNNNNNNNNNN PalAI RCCGGYNNNNNNNNNNNN PasI GTSAC PauI GCGGCCGC PceI TCGCGA PciI TGCGCA PciSI ATGCAT PcsI RCATGY PctI TTCGAA PdiI CACNNNNGTG PdmI GTAC PfeI TTAATTAA Pfl23II GCATGC Pfl1108I CTCGAG PflFI TCATGA PflMI GGCGCGCC PfoI CCCWGGG PhoI GCGCGC PinAI AGGCCT PlaDI ACATGT PleI GCTCTTCNNNN Ple19I WCGNNNNNNNCGW PmaCI GAATGCN PmeI GCCGGC PmlI GAANNNNTTC PpiI GAWTC PpsI CGTACG Ppu10I TCGTAG Ppu21I GACNNNGTC PpuMI CCANNNNNTGG PscI TCCNGGA PshAI GGCC PshBI ACCGGT PsiI CATCAGNNNNNNNNNNNNNNNNNNNNN Psp03I GAGTCNNNNN Psp5II CGATCG Psp6I CACGTG Psp1406I GTTTAAAC Psp124BI CACGTG PspCI GAACNNNNNCTCNNNNNNNNNNNNN PspEI GAGNNNNNGTTCNNNNNNNNNNNN PspGI GAGTCNNNNN PspLI ATGCAT PspN4I YACGTR PspOMI RGGWCCY PspOMII ACATGT PspPI GACNNNNGTC PspPPI ATTAAT PspPRI TTATAA PspXI GGWCC PsrI RGGWCCY PssI CCWGG PstI AACGTT PstNI GAGCTC PsuI CACGTG PsyI GGTNACC PteI CCWGG PvuI CGTACG PvuII GGNNCC RcaI GGGCCC RceI CGCCCARNNNNNNNNNNNNNNNNNNNN RgaI GGNCC RigI RGGWCCY RleAI CCYCAGNNNNNNNNNNNNNNN RpaBI VCTCGAGB RpaB5I GAACNNNNNNTACNNNNNNNNNNNN RruI GTANNNNNNGTTCNNNNNNNNNNNN RsaI RGGNCCY RsaNI CTGCAG RseI CAGNNNCTG RsrII RGATCY Rsr2I GACNNNGTC SacI GCGCGC SacII CGATCG SalI CAGCTG SapI TCATGA SaqAI CATCGACNNNNNNNNNNNNNNNNNNNN SatI GCGATCGC Sau96I GGCCGGCC Sau3AI CCCACANNNNNNNNNNNN SbfI CCCGCAGNNNNNNNNNNNNNNNNNNNN ScaI CGRGGACNNNNNNNNNNNNNNNNNNNN SchI TCGCGA SciI GTAC ScrFI GTAC SdaI CAYNNNNRTG SdeAI CGGWCCG SdeOSI CGGWCCG SduI GAGCTC SelI CCGCGG SetI GTCGAC SexAI GCTCTTCNNNN SfaAI TTAA SfaNI GCNGC SfcI GGNCC SfiI GATC SfoI CCTGCAGG Sfr274I AGTACT Sfr303I GAGTCNNNNN SfuI CTCGAG SgeI CCNGG SgfI CCTGCAGG SgrAI CAGRAGNNNNNNNNNNNNNNNNNNNNN SgrBI GACNNNNRTGANNNNNNNNNNNN SgrDI TCAYNNNNGTCNNNNNNNNNNNNN SgsI GDGCHC SimI CGCG SinI ASST SlaI ACCWGGT SmaI GCGATCGC SmiI GCATCNNNNNNNNN SmiMI CTRYAG SmlI GGCCNNNNNGGCC SmoI GGCGCC SmuI CTCGAG SnaI CCGCGG SnaBI TTCGAA SpeI CNNGNNNNNNNNNNNNN SphI GCGATCGC SpoDI CRCCGGYG SrfI CCGCGG Sse9I CGTCGACG Sse8387I GGCGCGCC Sse8647I GGGTC SseBI GGWCC SsiI CTCGAG SspI CCCGGG SspDI ATTTAAAT SspD5I CAYNNNNRTG SstI CTYRAG SstII CTYRAG SstE37I CCCGCNNNNNN Sth132I GTATAC Sth302II TACGTA StrI ACTAGT StsI GCATGC StuI GCGGRAG StyI GCCCGGGC StyD4I AATT SwaI CCTGCAGG TaaI AGGWCCT TaiI AGGCCT TaqI CCGC TaqII AATATT TasI GGCGCC TatI GGTGANNNNNNNN TauI GAGCTC TfiI CCGCGG TliI CGAAGACNNNNNNNNNNNNNNNNNNNN Tru1I CCCGNNNNNNNN Tru9I CCGG TscAI CTCGAG TseI GGATGNNNNNNNNNNNNNN TsoI AGGCCT Tsp45I CCWWGG Tsp509I CCNGG TspDTI ATTTAAAT TspEI ACNGT TspGWI ACGT TspMI TCGA TspRI GACCGANNNNNNNNNNN TssI CACCCANNNNNNNNNNN TstI AATT TsuI WGTACW Tth111I GCSGC Tth111II GAWTC UbaF9I CTCGAG UbaF11I TTAA UbaF12I TTAA UbaF13I CASTGNN UbaF14I GCWGC UbaPI TARCCANNNNNNNNNNN UnbI GTSAC Van91I AATT Vha464I ATGAANNNNNNNNNNN VneI AATT VpaK11AI ACGGANNNNNNNNNNN VpaK11BI CCCGGG VspI CASTGNN XagI GAGNNNCTC XapI CACNNNNNNTCCNNNNNNNNNNNN XbaI GGANNNNNNGTGNNNNNNNNNNNNN XceI GCGAC XcmI GACNNNGTC XhoI CAARCANNNNNNNNNNN XhoII TACNNNNNRTGT XmaI TCGTA XmaJI CTACNNNGTC XmiI GAGNNNNNNCTGG XmnI CCANNNNNTCG XspI CGAACG ZraI GGNCC ZrmI CCANNNNNTGG Zsp2I CTTAAG … LOCUS NM_001250672 1498 bp mRNA linear PLN 18-OCT-2018 DEFINITION Glycine max cationic peroxidase 2 (PRX2), mRNA. ACCESSION NM_001250672 VERSION NM_001250672.2 KEYWORDS RefSeq. SOURCE Glycine max (soybean) ORGANISM Glycine max Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja. REFERENCE 1 (bases 1 to 1498) AUTHORS Gijzen M, Miller SS, Bowman LA, Batchelor AK, Boutilier K and Miki BL. TITLE Localization of peroxidase mRNAs in soybean seeds by in situ hybridization JOURNAL Plant Mol. Biol. 41 (1), 57-63 (1999) PUBMED 10561068 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT099403.1. On Sep 4, 2012 this sequence version replaced NM_001250672.1. ##Evidence-Data-START## Transcript exon combination :: AK244214.1, AK286032.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00264986, SAMN00264988 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-1498 BT099403.1 1-1498 c FEATURES Location/Qualifiers source 1..1498 /organism=Glycine max /mol_type=mRNA /db_xref=taxon:3847 /chromosome=17 /map=17 gene 1..1498 /gene=PRX2 /note=cationic peroxidase 2 /db_xref=GeneID:547513 misc_feature 10..12 /gene=PRX2 /note=upstream in-frame stop codon CDS 25..1020 /gene=PRX2 /EC_number=1.11.1.7 /note=class III plant peroxidase /codon_start=1 /product=cationic peroxidase 2 precursor /protein_id=NP_001237601.1 /db_xref=GeneID:547513 /translation=MAPKGLIFLAVLCFSALSLSRCLAEDNGLVMNFYKESCPQAEDI IKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRN FRYIETIKEALERECPGVVSCADILVLSARDGIVSLGGPHIPLKTGRRDGRRSRADVV EQFLPDHNESISAVLDKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEIDPALN PDHVPHILKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLAND KRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKQCNAANKHHEEP sig_peptide 25..96 /gene=PRX2 /inference=COORDINATES: ab initio prediction:SignalP:4.0 ORIGIN 1 gagcaagagt gaagagcgaa gagaatggct cccaagggtt taatcttttt ggctgtgtta 61 tgcttctcag cactgtcact gagtcgttgt cttgcggagg ataatggact tgttatgaac 121 ttctacaagg aatcatgccc tcaggctgaa gacatcatca aagaacaagt caagcttctc 181 tacaagcgcc acaagaacac tgctttctcc tggctcagaa acatcttcca tgactgtgct 241 gttcagagtt gtgatgcttc actgttgctg gactccacaa gaaggagctt gtctgagaag 301 gaaacagata gaagctttgg gttgagaaat ttcaggtaca ttgagaccat caaagaagct 361 ttggaaaggg aatgcccagg agttgtttcc tgtgctgata tcctcgttct ctctgccaga 421 gatggcattg tttcgctagg aggtccccat atccctctta aaacaggaag aagggatggt 481 agaaggagca gagccgatgt ggtagagcag ttcctcccag accacaatga atccatttct 541 gcagttcttg acaagtttgg tgccatggga attgacaccc ccggcgtagt tgcattgctt 601 ggagcacaca gtgttggtcg aacccattgt gtgaagttgg tgcaccgttt gtacccagag 661 attgatccag ctctgaaccc tgaccacgtc cctcacattc tgaagaagtg ccctgatgcc 721 attccagacc ctaaggccgt gcagtacgtg agaaacgacc gtggcacccc catgattcta 781 gacaacaatt actacagaaa tatattggac aacaagggct tgttgatagt ggatcaccaa 841 ctagccaatg acaagaggac caagccttat gtgaagaaaa tggccaagag ccaggactat 901 ttcttcaagg agttttctag agccattact ttgctctctg agaacaaccc tctcactggc 961 acaaagggtg agatcagaaa gcagtgcaat gctgccaaca agcaccatga ggagccttaa 1021 ttgcttcccg cttaatttgg gccttgaatt ttcttcccct tctctatgtg gaagaaatct 1081 gtaagatatt atgcaaaaaa taattaaggt gtttttcttt aaatgggttg gttgattggt 1141 tcaatgaacc gatcaagacc acagcaggtt catggggatg cgaggattaa gacgctttgt 1201 tttttaatct tccgatgtca ctcttgtttg ttagtttgtt tttttatttt ttatttcaat 1261 aagtactgtg caagtaggtt agagttgggt agaagggcat gttcatggtg ttaattacta 1321 tgttatgtat gcatgtgagt gctgctatcg atggcaagat gtcaatgtat gcgtgtagtg 1381 ctgttatcga tgagagtgaa aatgtttatg atatccacac taataaagct agcttgctct 1441 tgctacataa taaataaatc atggcccacg gtcattatac aaaaaaaaaa aaaaaaaa //
73649
CATEGORIES
Economics Nursing Applied Sciences Psychology Science Management Computer Science Human Resource Management Accounting Information Systems English Anatomy Operations Management Sociology Literature Education Business & Finance Marketing Engineering Statistics Biology Political Science Reading History Financial markets Philosophy Mathematics Law Criminal Architecture and Design Government Social Science World history Chemistry Humanities Business Finance Writing Programming Telecommunications Engineering Geography Physics Spanish ach e. Embedded Entrepreneurship f. Three Social Entrepreneurship Models g. Social-Founder Identity h. Micros-enterprise Development Outcomes Subset 2. Indigenous Entrepreneurship Approaches (Outside of Canada) a. Indigenous Australian Entrepreneurs Exami Calculus (people influence of  others) processes that you perceived occurs in this specific Institution Select one of the forms of stratification highlighted (focus on inter the intersectionalities  of these three) to reflect and analyze the potential ways these ( American history Pharmacology Ancient history . Also Numerical analysis Environmental science Electrical Engineering Precalculus Physiology Civil Engineering Electronic Engineering ness Horizons Algebra Geology Physical chemistry nt When considering both O lassrooms Civil Probability ions Identify a specific consumer product that you or your family have used for quite some time. This might be a branded smartphone (if you have used several versions over the years) or the court to consider in its deliberations. Locard’s exchange principle argues that during the commission of a crime Chemical Engineering Ecology aragraphs (meaning 25 sentences or more). Your assignment may be more than 5 paragraphs but not less. INSTRUCTIONS:  To access the FNU Online Library for journals and articles you can go the FNU library link here:  https://www.fnu.edu/library/ In order to n that draws upon the theoretical reading to explain and contextualize the design choices. Be sure to directly quote or paraphrase the reading ce to the vaccine. Your campaign must educate and inform the audience on the benefits but also create for safe and open dialogue. A key metric of your campaign will be the direct increase in numbers.  Key outcomes: The approach that you take must be clear Mechanical Engineering Organic chemistry Geometry nment Topic You will need to pick one topic for your project (5 pts) Literature search You will need to perform a literature search for your topic Geophysics you been involved with a company doing a redesign of business processes Communication on Customer Relations. Discuss how two-way communication on social media channels impacts businesses both positively and negatively. Provide any personal examples from your experience od pressure and hypertension via a community-wide intervention that targets the problem across the lifespan (i.e. includes all ages). Develop a community-wide intervention to reduce elevated blood pressure and hypertension in the State of Alabama that in in body of the report Conclusions References (8 References Minimum) *** Words count = 2000 words. *** In-Text Citations and References using Harvard style. *** In Task section I’ve chose (Economic issues in overseas contracting)" Electromagnetism w or quality improvement; it was just all part of good nursing care.  The goal for quality improvement is to monitor patient outcomes using statistics for comparison to standards of care for different diseases e a 1 to 2 slide Microsoft PowerPoint presentation on the different models of case management.  Include speaker notes... .....Describe three different models of case management. visual representations of information. They can include numbers SSAY ame workbook for all 3 milestones. You do not need to download a new copy for Milestones 2 or 3. When you submit Milestone 3 pages): Provide a description of an existing intervention in Canada making the appropriate buying decisions in an ethical and professional manner. Topic: Purchasing and Technology You read about blockchain ledger technology. Now do some additional research out on the Internet and share your URL with the rest of the class be aware of which features their competitors are opting to include so the product development teams can design similar or enhanced features to attract more of the market. The more unique low (The Top Health Industry Trends to Watch in 2015) to assist you with this discussion.         https://youtu.be/fRym_jyuBc0 Next year the $2.8 trillion U.S. healthcare industry will   finally begin to look and feel more like the rest of the business wo evidence-based primary care curriculum. Throughout your nurse practitioner program Vignette Understanding Gender Fluidity Providing Inclusive Quality Care Affirming Clinical Encounters Conclusion References Nurse Practitioner Knowledge Mechanics and word limit is unit as a guide only. The assessment may be re-attempted on two further occasions (maximum three attempts in total). All assessments must be resubmitted 3 days within receiving your unsatisfactory grade. You must clearly indicate “Re-su Trigonometry Article writing Other 5. June 29 After the components sending to the manufacturing house 1. In 1972 the Furman v. Georgia case resulted in a decision that would put action into motion. Furman was originally sentenced to death because of a murder he committed in Georgia but the court debated whether or not this was a violation of his 8th amend One of the first conflicts that would need to be investigated would be whether the human service professional followed the responsibility to client ethical standard.  While developing a relationship with client it is important to clarify that if danger or Ethical behavior is a critical topic in the workplace because the impact of it can make or break a business No matter which type of health care organization With a direct sale During the pandemic Computers are being used to monitor the spread of outbreaks in different areas of the world and with this record 3. Furman v. Georgia is a U.S Supreme Court case that resolves around the Eighth Amendments ban on cruel and unsual punishment in death penalty cases. The Furman v. Georgia case was based on Furman being convicted of murder in Georgia. Furman was caught i One major ethical conflict that may arise in my investigation is the Responsibility to Client in both Standard 3 and Standard 4 of the Ethical Standards for Human Service Professionals (2015).  Making sure we do not disclose information without consent ev 4. Identify two examples of real world problems that you have observed in your personal Summary & Evaluation: Reference & 188. Academic Search Ultimate Ethics We can mention at least one example of how the violation of ethical standards can be prevented. Many organizations promote ethical self-regulation by creating moral codes to help direct their business activities *DDB is used for the first three years For example The inbound logistics for William Instrument refer to purchase components from various electronic firms. During the purchase process William need to consider the quality and price of the components. In this case 4. A U.S. Supreme Court case known as Furman v. Georgia (1972) is a landmark case that involved Eighth Amendment’s ban of unusual and cruel punishment in death penalty cases (Furman v. Georgia (1972) With covid coming into place In my opinion with Not necessarily all home buyers are the same! When you choose to work with we buy ugly houses Baltimore & nationwide USA The ability to view ourselves from an unbiased perspective allows us to critically assess our personal strengths and weaknesses. This is an important step in the process of finding the right resources for our personal learning style. Ego and pride can be · By Day 1 of this week While you must form your answers to the questions below from our assigned reading material CliftonLarsonAllen LLP (2013) 5 The family dynamic is awkward at first since the most outgoing and straight forward person in the family in Linda Urien The most important benefit of my statistical analysis would be the accuracy with which I interpret the data. The greatest obstacle From a similar but larger point of view 4 In order to get the entire family to come back for another session I would suggest coming in on a day the restaurant is not open When seeking to identify a patient’s health condition After viewing the you tube videos on prayer Your paper must be at least two pages in length (not counting the title and reference pages) The word assimilate is negative to me. I believe everyone should learn about a country that they are going to live in. It doesnt mean that they have to believe that everything in America is better than where they came from. It means that they care enough Data collection Single Subject Chris is a social worker in a geriatric case management program located in a midsize Northeastern town. She has an MSW and is part of a team of case managers that likes to continuously improve on its practice. The team is currently using an I would start off with Linda on repeating her options for the child and going over what she is feeling with each option.  I would want to find out what she is afraid of.  I would avoid asking her any “why” questions because I want her to be in the here an Summarize the advantages and disadvantages of using an Internet site as means of collecting data for psychological research (Comp 2.1) 25.0\% Summarization of the advantages and disadvantages of using an Internet site as means of collecting data for psych Identify the type of research used in a chosen study Compose a 1 Optics effect relationship becomes more difficult—as the researcher cannot enact total control of another person even in an experimental environment. Social workers serve clients in highly complex real-world environments. Clients often implement recommended inte I think knowing more about you will allow you to be able to choose the right resources Be 4 pages in length soft MB-920 dumps review and documentation and high-quality listing pdf MB-920 braindumps also recommended and approved by Microsoft experts. The practical test g One thing you will need to do in college is learn how to find and use references. References support your ideas. College-level work must be supported by research. You are expected to do that for this paper. You will research Elaborate on any potential confounds or ethical concerns while participating in the psychological study 20.0\% Elaboration on any potential confounds or ethical concerns while participating in the psychological study is missing. Elaboration on any potenti 3 The first thing I would do in the family’s first session is develop a genogram of the family to get an idea of all the individuals who play a major role in Linda’s life. After establishing where each member is in relation to the family A Health in All Policies approach Note: The requirements outlined below correspond to the grading criteria in the scoring guide. At a minimum Chen Read Connecting Communities and Complexity: A Case Study in Creating the Conditions for Transformational Change Read Reflections on Cultural Humility Read A Basic Guide to ABCD Community Organizing Use the bolded black section and sub-section titles below to organize your paper. For each section Losinski forwarded the article on a priority basis to Mary Scott Losinksi wanted details on use of the ED at CGH. He asked the administrative resident